BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015F08SP1|AL426884
(928 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1189 1837 0.0
>3x_Contig1189
Length = 5010
Score = 1837 bits (926), Expect = 0.0
Identities = 927/928 (99%)
Strand = Plus / Minus
Query: 1 gatcaactacagcattcccatccttttttatctttcaatgtaacctatctaatgttataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4288 gatcaactacagcattcccatccttttttatctttcaatgtaacctatctaatgttataa 4229
Query: 61 taactgactatgtatctggaatattaaaactactttggatgaacaacaagaaaagtgccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4228 taactgactatgtatctggaatattaaaactactttggatgaacaacaagaaaagtgccc 4169
Query: 121 gcaagcttatctgcatttccccagggaaaacagtcggtatggaattagaaatgaaatccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4168 gcaagcttatctgcatttccccagggaaaacagtcggtatggaattagaaatgaaatccg 4109
Query: 181 aatggaaagaaaaaagagattgggtatcaaatggcagggcttataacagacctcctgcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4108 aatggaaagaaaaaagagattgggtatcaaatggcagggcttataacagacctcctgcaa 4049
Query: 241 attaccacccttgtattcctatttcgattcgaaaagctaggtttgcttcaagtttcgcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4048 attaccacccttgtattcctatttcgattcgaaaagctaggtttgcttcaagtttcgcgt 3989
Query: 301 ttttaggtcttttttttttcaagtcattttccttcctagtatggtgaacattcttttcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3988 ttttaggtcttttttttttcaagtcattttccttcctagtatggtgaacattcttttcaa 3929
Query: 361 ttagtataactgttacagtaaatgattttagaaagaataatttaccagaagtggaagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3928 ttagtataactgttacagtaaatgattttagaaagaataatttaccagaagtggaagaaa 3869
Query: 421 tattagctgtcttgttaatagttttctgccacactcgttttgaatttggtaggttttttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3868 tattagctgtcttgttaatagttttctgccacactcgttttgaatttggtaggttttttc 3809
Query: 481 ttccattgttatttggcatacatatataccaagacgtgaagtttaattgtgtttttcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3808 ttccattgttatttggcatacatatataccaagacgtgaagtttaattgtgtttttcttt 3749
Query: 541 ggtgaaaattgtacctgagggaaatactgagaaattgagacaaggctcatcacataaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3748 ggtgaaaattgtacctgagggaaatactgagaaattgagacaaggctcatcacataaaac 3689
Query: 601 tggaagtagattaaaccataaaagttatcgtgaaaaaaataatttcaattcacttcaacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3688 tggaagtagattaaaccataaaagttatcgtgaaaaaaataatttcaattcacttcaacc 3629
Query: 661 atcttcaaccacgaccaattgaattcactagacggtaccagatatcagacatagagagtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3628 atcttcaaccacgaccaattgaattcactagacggtaccagatatcagacatagagagtt 3569
Query: 721 atttatctaggcaagcgaatctcactctgataaaaacgatatattacaccacattcattc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3568 atttatctaggcaagcgaatctcactctgataaaaacgatatattacaccacattcattc 3509
Query: 781 tcataagaaattatcattcaaacctttacgcgactggggaacattataacttgtagcttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3508 tcataagaaattatcattcaaacctttacgcgactggggaacattataacttgtagcttg 3449
Query: 841 gccaatactatcacaatatatcagaaatgaacggtaacggaataacgacgttaaagggtg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3448 gccaatactatcacaatatatcagaaatgaacggtaacggaataacgacgttaaagggtg 3389
Query: 901 acacaattggcccgtggragttgggctc 928
||||||||||||||||| ||||||||||
Sbjct: 3388 acacaattggcccgtggaagttgggctc 3361
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,479
Number of Sequences: 1807
Number of extensions: 10479
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)